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Manghi, Manoel; Rousseau, Philippe; Bédel, Quentin; Vicente, Sylvain; Boubekeur, Kenza; Le Floch, Erwan; Destainville, Nicolas; Tardin, Catherine (2025) Crowders-Induced Compaction of Multi-kbp Long DNA Molecules Followed by TPM. Macromolecules, 58 (19). doi:10.1021/acs.macromol.5c00631

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Reference TypeJournal (article/letter/editorial)
TitleCrowders-Induced Compaction of Multi-kbp Long DNA Molecules Followed by TPM
JournalMacromolecules
AuthorsManghi, ManoelAuthor
Rousseau, PhilippeAuthor
Bédel, QuentinAuthor
Vicente, SylvainAuthor
Boubekeur, KenzaAuthor
Le Floch, ErwanAuthor
Destainville, NicolasAuthor
Tardin, CatherineAuthor
Year2025 (October 14)Volume58
Issue19
PublisherAmerican Chemical Society (ACS)
DOIdoi:10.1021/acs.macromol.5c00631Search in ResearchGate
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Mindat Ref. ID19065104Long-form Identifiermindat:1:5:19065104:8
GUID0
Full ReferenceManghi, Manoel; Rousseau, Philippe; Bédel, Quentin; Vicente, Sylvain; Boubekeur, Kenza; Le Floch, Erwan; Destainville, Nicolas; Tardin, Catherine (2025) Crowders-Induced Compaction of Multi-kbp Long DNA Molecules Followed by TPM. Macromolecules, 58 (19). doi:10.1021/acs.macromol.5c00631
Plain TextManghi, Manoel; Rousseau, Philippe; Bédel, Quentin; Vicente, Sylvain; Boubekeur, Kenza; Le Floch, Erwan; Destainville, Nicolas; Tardin, Catherine (2025) Crowders-Induced Compaction of Multi-kbp Long DNA Molecules Followed by TPM. Macromolecules, 58 (19). doi:10.1021/acs.macromol.5c00631
In(2025, October) Macromolecules Vol. 58 (19). American Chemical Society (ACS)

References Listed

These are the references the publisher has listed as being connected to the article. Please check the article itself for the full list of references which may differ. Not all references are currently linkable within the Digital Library.

Not Yet Imported: Microbiological Reviews - journal-article : 10.1128/mr.58.2.211-232.1994

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Not Yet Imported: Molecular Microbiology - journal-article : 10.1111/j.1365-2958.2012.08081.x

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Not Yet Imported: - journal-article : 10.1074/jbc.M114.557348

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Not Yet Imported: - journal-article : 10.1128/mbio.00143-20

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Not Yet Imported: - journal-article : 10.1111/mmi.14467

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Not Yet Imported: eLife - journal-article : 10.7554/elife.82654

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Not Yet Imported: Annual Review of Microbiology - journal-article : 10.1146/annurev-micro-033021-113232

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Collette, Dylan, Dunlap, David, Finzi, Laura (2023) Macromolecular Crowding and DNA: Bridging the Gap between In Vitro and In Vivo. International Journal of Molecular Sciences, 24 (24) 17502 doi:10.3390/ijms242417502
Lerman, L. S. (1971) A Transition to a Compact Form of DNA in Polymer Solutions. Proceedings of the National Academy of Sciences, 68 (8) 1886-1890 doi:10.1073/pnas.68.8.1886
Not Yet Imported: - journal-article : 10.1002/bip.1979.360180612

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Asakura, Sho, Oosawa, Fumio (1954) On Interaction between Two Bodies Immersed in a Solution of Macromolecules. The Journal of Chemical Physics, 22 (7) 1255-1256 doi:10.1063/1.1740347
Not Yet Imported: - journal-article : 10.1002/pol.1958.1203312618

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Castelnovo, M., Gelbart, W. M. (2004) Semiflexible Chain Condensation by Neutral Depleting Agents:  Role of Correlations between Depletants. Macromolecules, 37. 3510-3517 doi:10.1021/ma0354795
Not Yet Imported: - journal-article : 10.1016/j.biochi.2010.06.024

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
de Vries, Renko (2006) Depletion-induced instability in protein-DNA mixtures: Influence of protein charge and size. The Journal of Chemical Physics, 125 (1). 14905pp. doi:10.1063/1.2209683
Yoshikawa, Kenichi, Hirota, Seiko, Makita, Naoko, Yoshikawa, Yuko (2010) Compaction of DNA Induced by Like-Charge Protein: Opposite Salt-Effect against the Polymer-Salt-Induced Condensation with Neutral Polymer. The Journal of Physical Chemistry Letters, 1 (12). 1763-1766 doi:10.1021/jz100569e
Not Yet Imported: Analytical Chemistry - journal-article : 10.1021/acs.analchem.0c00184

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Not Yet Imported: - journal-article : 10.1016/S0006-3495(94)80735-0

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Segall, Darren E., Nelson, Philip C., Phillips, Rob (2006) Volume-Exclusion Effects in Tethered-Particle Experiments: Bead Size Matters. Physical Review Letters, 96 (8). doi:10.1103/physrevlett.96.088306
Not Yet Imported: - journal-article : 10.1093/nar/gks250

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Not Yet Imported: - journal-article : 10.1088/1478-3975/7/4/046003

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Not Yet Imported: - journal-article : 10.1016/j.ymeth.2019.07.006

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Not Yet Imported: - journal-article : 10.1093/nar/gkv201

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Guilbaud, Sébastien, Salomé, Laurence, Destainville, Nicolas, Manghi, Manoel, Tardin, Catherine (2019) Dependence of DNA Persistence Length on Ionic Strength and Ion Type. Physical Review Letters, 122 (2). doi:10.1103/physrevlett.122.028102
Not Yet Imported: - journal-article : 10.3390/ijms21249553

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Vasilevskaya, V. V., Khokhlov, A. R., Matsuzawa, Y., Yoshikawa, K. (1995) Collapse of single DNA molecule in poly(ethylene glycol) solutions. The Journal of Chemical Physics, 102 (16). 6595-6602 doi:10.1063/1.469375
Not Yet Imported: - journal-article : 10.1016/j.polymer.2009.08.023

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Jachimska, Barbara, Wasilewska, Monika, Adamczyk, Zbigniew (2008) Characterization of Globular Protein Solutions by Dynamic Light Scattering, Electrophoretic Mobility, and Viscosity Measurements. Langmuir, 24. 6866-6872 doi:10.1021/la800548p
de Gennes P.-G. (1979) Scaling Concepts in Polymer Physics
des Cloiseaux J. (1987) Les Polymères En Solution: Leur Modélisation Et Leur Structure
Grosberg A. Y. (1994) Statistical Physics of Macromolecules
Sear, Richard P. (1998) Coil-globule transition of a semiflexible polymer driven by the addition of spherical particles. Physical Review E, 58 (1) 724-728 doi:10.1103/physreve.58.724
Not Yet Imported: - book : 10.1007/978-94-007-1223-2

If you would like this item imported into the Digital Library, please contact us quoting Book ID 9789400712225
Kang, Hongsuk, Pincus, Philip A., Hyeon, Changbong, Thirumalai, D. (2015) Effects of Macromolecular Crowding on the Collapse of Biopolymers. Physical Review Letters, 114 (6). doi:10.1103/physrevlett.114.068303
Not Yet Imported: - journal-article : 10.1039/c4sm02198c

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Not Yet Imported: - journal-article : 10.1039/C6SM01184E

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Not Yet Imported: - journal-article : 10.1039/d3sm01522j

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Not Yet Imported: Journal de Physique Lettres - journal-article : 10.1051/jphyslet:0197500360305500

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Muthukumar M. (2011) Polymer Translocation
Joyeux, Marc (2024) Tethered Particle Motion Technique in Crowded Media: Compaction of DNA by Globular Macromolecules. The Journal of Physical Chemistry B, 128 (29) 7227-7236 doi:10.1021/acs.jpcb.4c03033
Jung, Youngkyun, Sadeghi, Amir, Ha, Bae-Yeun (2024) Modeling the compaction of bacterial chromosomes by biomolecular crowding and the cross-linking protein H-NS. Scientific Reports, 14 (1) doi:10.1038/s41598-023-50355-2
Not Yet Imported: - journal-article : 10.1529/biophysj.105.061242

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Not Yet Imported: Biophysical Journal - journal-article : 10.1016/j.bpj.2012.03.073

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Brangwynne, Clifford P., Tompa, Peter, Pappu, Rohit V. (2015) Polymer physics of intracellular phase transitions. Nature Physics, 11 (11). 899-904 doi:10.1038/nphys3532
Not Yet Imported: ACS Nano - journal-article : 10.1021/acsnano.4c01534

If you would like this item imported into the Digital Library, please contact us quoting Journal ID
Not Yet Imported: - journal-article : 10.1016/j.enzmictec.2016.02.004

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See Also

These are possibly similar items as determined by title/reference text matching only.

Brunet, Annaël, Tardin, Catherine, Salomé, Laurence, Rousseau, Philippe, Destainville, Nicolas, Manghi, Manoel (2015) Dependence of DNA Persistence Length on Ionic Strength of Solutions with Monovalent and Divalent Salts: A Joint Theory–Experiment Study. Macromolecules, 48. 3641-3652 doi:10.1021/acs.macromol.5b00735
Sicard, François, Destainville, Nicolas, Rousseau, Philippe, Tardin, Catherine, Manghi, Manoel (2020) Dynamical control of denaturation bubble nucleation in supercoiled DNA minicircles. Physical Review E, 101 (1) doi:10.1103/physreve.101.012403
Guilbaud, Sébastien, Salomé, Laurence, Destainville, Nicolas, Manghi, Manoel, Tardin, Catherine (2019) Dependence of DNA Persistence Length on Ionic Strength and Ion Type. Physical Review Letters, 122 (2). doi:10.1103/physrevlett.122.028102
Barde, Céline, Destainville, Nicolas, Manghi, Manoel (2018) Energy required to pinch a DNA plectoneme. Physical Review E, 97 (3) doi:10.1103/physreve.97.032412
Cornet, Julie, Destainville, Nicolas, Manghi, Manoel (2020) Domain formation in bicomponent vesicles induced by composition-curvature coupling. The Journal of Chemical Physics, 152 (24) 244705pp. doi:10.1063/5.0006756
Manghi, Manoel, Destainville, Nicolas (2010) Statistical Mechanics and Dynamics of Two Supported Stacked Lipid Bilayers. Langmuir, 26. 4057-4068 doi:10.1021/la903504n
Sicard, François, Destainville, Nicolas, Manghi, Manoel (2015) DNA denaturation bubbles: Free-energy landscape and nucleation/closure rates. The Journal of Chemical Physics, 142 (3). 34903pp. doi:10.1063/1.4905668
Dasanna, Anil Kumar, Destainville, Nicolas, Palmeri, John, Manghi, Manoel (2013) Slow closure of denaturation bubbles in DNA: Twist matters. Physical Review E, 87 (5) doi:10.1103/physreve.87.052703
Dasanna, Anil Kumar, Destainville, Nicolas, Palmeri, John, Manghi, Manoel (2012) Strand diffusion-limited closure of denaturation bubbles in DNA. EPL (Europhysics Letters), 98. 38002pp. doi:10.1209/0295-5075/98/38002
Berger, Mareike, Manghi, Manoel, Destainville, Nicolas (2016) Nanodomains in Biomembranes with Recycling. The Journal of Physical Chemistry B, 120 (40). 10588-10602 doi:10.1021/acs.jpcb.6b07631
Palmeri, John, Manghi, Manoel, Destainville, Nicolas (2008) Thermal denaturation of fluctuating finite DNA chains: The role of bending rigidity in bubble nucleation. Physical Review E, 77 (1) doi:10.1103/physreve.77.011913
 
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